[Source_Name: Short_Name='R/V AA']
Venom on Ice - data collected from the CEAMARC voyage of the Aurora Australis, voyage 3 2007-2008Entry ID: CEAMARC_CASO_200708_V3_Venom
Abstract: Accompanying excel spreadsheet details the DNA samples taken and venom glands obtained and associated date/location/depth collection site data.
Each specimen will be DNA barcoded using the diagnostic 600bp region of the mitochondrial COI gene and sequences lodged on GenBank. DNA barcoding will aid in evaluating the extent of cephalopod biodiversity including revealing cryptic species and ... phylogeographic structure. Confirmation of species identities is also essential as glands from multiple individuals will be required for detailed proteomic analysis of the proteins produced by the octopus posterior salivary glands. The chemical composition of the secretions will be determined through the application of multidisciplinary techniques, including cDNA library construction, mass spectrometry, molecular modelling and bioactivity testing. The studies will commence in 2008 and run for several years, being the major element in a PhD project run through Dr. Fry's laboratory.
Excel file with the following columns:
Tissue Tissue Storage
Data Set Citation
Dataset Originator/Creator: Fry, B.G.
Dataset Title: Venom on Ice - data collected from the CEAMARC voyage of the Aurora Australis, voyage 3 2007-2008
Dataset Series Name: CAASM Metadata
Dataset Release Date: 2013-02-19
Dataset Publisher: Australian Antarctic Data Centre
Dataset DOI: doi:10.4225/15/5a1247986402bOnline Resource: https://data.aad.gov.au/aadc/metadata/metadata_redirect.cfm?md=/AMD...
Start Date: 2007-12-22Stop Date: 2008-01-08
Quality Date, depth, location quality excellent.
2018-09-25 - The original files was reformatted to fit OBIS/GBFI/IPT Biodiversity.AQ tracking standards, and a new datasheet "CEAMARC_Venomous_animals2007_08.csv" was created. The new dataset contains datasetID, occurrenceID, eventID, eventRemarks, locality, verbatimLatitude, verbatimLongitude, decimalLatitude, decimalLongitude, continent, countryCode, occurrenceStatus, organismQuantity, organismQuantityType, basisOfRecord, minimumDepthInMeters, maximumDepthInMeters, samplingProtocol, and associatedReferences. The lowest taxonomical rank of the species identified that could be determined is provided, after matched in WoRMS (World Register of Marine Species).
Access Constraints These data are publicly available for download from the provided URL. Copies of the referenced papers are available for download to AAD Staff Only.
Use Constraints This data set conforms to the PICCCBY Attribution License
Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=CEAMARC_... when using these data.
Data Set Progress
Distribution Media: HTTP
Distribution Size: 79 kb
Distribution Format: Excel
Role: TECHNICAL CONTACT
Phone: +61 7 336 58515
Email: bgfry at uq.edu.au
University of Queensland
City: Brisbane St Lucia
Province or State: QLD
Postal Code: 4072
Role: DIF AUTHOR
National Oceans Office GPO Box 2139
Province or State: Tasmania
Postal Code: 7000
Tim Ruder, Kartik Sunagar, Eivind A. B. Undheim, Syed A. Ali, Tak-Cheung Wai, Dolyce H. W. Low, Timothy N. W. Jackson, Glenn F. King, Agostinho Antunes, Bryan G. Fry (2013), Molecular Phylogeny and Evolution of the Proteins Encoded by Coleoid (Cuttlefish, Octopus, and Squid) Posterior Venom Glands., Journal of Molecular Evolution, doi:DOI 10.1007/s00239-013-9552-5
Eivind Andreas Baste Undheim, Janette Ann Norman, Hanne Halkinrud Thoen, Bryan Grieg Fry (2010), Genetic identification of Southern Ocean octopod samples using mtCOI., Comptes Rendus Biologies, doi:doi:10.1016/j.crvi.2010.02.002
Eivind Andreas Baste Undheim (2009), Venom in Southern Ocean Octopodids (Cephalopoda: Octopoda) Properties, Ecological Importance and Adaptive Evolution., Master Thesis, Norwegian University of Science and Technology
Extended Metadata Properties
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Creation and Review Dates
DIF Creation Date: 2008-04-15
Last DIF Revision Date: 2018-09-28